I think I finally fixed mine. Buddy squared the heads (shaved them), head gaskets, timing belt, drive belts, seals, etc. Anyway, he works for a Sube shop (not the dealer).
But he said he had a customer that replaced the whole main engine harness (goes to TPS, coil packs and about 10 other things) and that had fixed his random flashing ATF code.
I got one through his shop which can buy from the Subaru dealer at substantial discount. Anyway, I have driven it all week and can't get the TPS code or flashing ATF no matter what I do to it. The list on the harness is $179 for the 2000 legacy and it is some work to install. He had the engine out of the car and the engine down to the head gaskets, so it was no big deal to do it then.
Finally, there seems to be some tension where the TPS plug is on the harness, they just come that way. But on mine, that wasn't where the short was. I don't know where it was, but it wasn't right there because changing the plug and splicing the replacement plug in with extra wire to relieve the tension had not worked on the old harness.
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Friday, March 19th, 2010 AT 6:39 PM