Sorry. Mechanical meaning it is a part failure and not just an electronic induced misfire. Normally if you feel them they are a mechanical component and not a faulty PCM or sensor that sets a check engine light because it thinks it is misfiring but you never feel it.
Just to recap, short term is between 0-3 positive with no vacuum leak shown on the gauge, no exhaust valve issue shown, swapped injector and plug, misfires at idle warm or cold. If this is all the case, swap the o2 sensors side to side (appears they are the same) and see if the misfire moves banks. If not, then I would replace all the injectors. If the short term on that side is showing to positive 3 when it have a misfire then it is commanding more fuel. Granted positive 3 is not much but I just had a vehicle that was doing something very similar. Basically we found that when we unplugged the injector the misfire did not change. However, we only had single cylinder misfire but replacing all the injectors corrected it.
We found out that the PCM was adjusting all the pulse widths to compensate for the single cylinder. It may no sense at the time but does after the fact.
One way to try to confirm this is to monitor the o2 voltage when you unplug the injector. I understand the short term went to 0 but that is because that is a PCM output. You should still get o2 voltage. You should see the o2 respond lean since you have a cylinder on that side pumping nothing but air. If you don't then the injectors are leaking.
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Sunday, December 29th, 2019 AT 7:14 PM